Ensembl Human

 

Karyotype

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chromosome MT chromosome Y chromosome X chromosome 22 chromosome 21 chromosome 20 chromosome 19 chromosome 18 chromosome 17 chromosome 16 chromosome 15 chromosome 14 chromosome 13 chromosome 12 chromosome 11 chromosome 10 chromosome 9 chromosome 8 chromosome 7 chromosome 6 chromosome 5 chromosome 4 chromosome 3 chromosome 2 chromosome 1 Human karyotype selector

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About the Human genome

Assembly

Homo sapiensThis release is based on the NCBI 36 assembly of the human genome [November 2005].

The International Human Genome Sequencing Consortium have published their scientific analysis of the finished human genome.

Annotation

The human genome sequence is now considered sufficiently stable that the three major genome browsers have come together to produce a common set of gene IDs for their annotations. This Consensus CDS ID set has been encorporated into the Ensembl database alongside the existing identifiers.

The ENCODE (ENCyclopedia Of DNA Elements) project aims to find functional elements in the human genome.

What's New in Ensembl 38

Homo sapiens News

  • New Human assembly and genebuild
    Ensembl Human is now based on the NCBI 36 assembly, released in November 2005.
    Read more...
  • cDNA Updates
    The Ensembl Human and Mouse cDNA database have received their regular updates.
  • Compara whole genome alignments

    The following updates have been made to ensembl_compara.
    Read more...

  • Updates to variation displays

    The following pages have new features.
    Read more...

  • New variation data
    Ensembl Human and Mouse have new variation databases. Human has the SNPs from dbSNP125 mapped to the new assembly, whilst in Mouse, strain polymorphism data from Celera reads are now viewable in Mart.

More news...

Statistics

Assembly: NCBI 36, Oct 2005
Genebuild: Ensembl, Mar 2006
Database version: 38.36
Known genes: 21,206
Novel genes: 2,135
Pseudogenes: 719
RNA genes: 1,430
Genscan gene predictions: 69,185
Gene exons: 164,357
Gene transcripts: 25,078
Base Pairs: 3,433,077,231
Golden Path Length: 2,889,532,597
Most common InterPro domains: Top 40 Top 500

*See the MapView help page for more information on gene counts


 

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Ensembl v38 - Apr 2006
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